2E42

Crystal structure of C/EBPbeta Bzip homodimer V285A mutant bound to A High Affinity DNA fragment


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.232 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structural Basis for Flexible Base Recognition by C/Ebpbeta

Tahirov, T.H.Inoue-Bungo, T.Sato, K.Shiina, M.Hamada, K.Ogata, K.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
CCAAT/enhancer-binding protein beta
A, B
78Homo sapiensMutation(s): 1 
Gene Names: CEBPB (TCF5)
Find proteins for P17676 (Homo sapiens)
Go to Gene View: CEBPB
Go to UniProtKB:  P17676
Entity ID: 1
MoleculeChainsLengthOrganism
DNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3')C16N/A
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3')D16N/A
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.232 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 101.881α = 90.00
b = 113.319β = 90.00
c = 74.439γ = 90.00
Software Package:
Software NamePurpose
CNSrefinement
HKL-2000data reduction
SCALEPACKdata scaling
CNSphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-12-18
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance