2E19 | pdb_00002e19

Solution structure of the homeobox domain from human NIL-2-A zinc finger protein, transcription factor 8

PDB DOI: https://doi.org/10.2210/pdb2E19/pdb
BMRB: 10297

Classification: TRANSCRIPTION
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2006-10-19 Released: 2007-04-24
Deposition Author(s): Ohnishi, S., Tochio, N., Koshiba, S., Harada, T., Watanabe, S., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations,target function

wwPDB Validation 3D Report Full Report

Validation slider image for 2E19

This is version 1.4 of the entry. See complete history.

Literature

Solution structure of the homeobox domain from human NIL-2-A zinc finger protein, transcription factor 8

Ohnishi, S., Tochio, N., Koshiba, S., Harada, T., Watanabe, S., Kigawa, T., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 6.83 kDa
Atom Count: 479
Modeled Residue Count: 64
Deposited Residue Count: 64
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Transcription factor 8	A	64	Homo sapiens	Mutation(s): 0 Gene Names: TCF8, AREB6
UniProt & NIH Common Fund Data Resources
Find proteins for P37275 (Homo sapiens) Explore P37275 Go to UniProtKB: P37275
PHAROS: P37275 GTEx: ENSG00000148516
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P37275
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations,target function

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2007-04-24

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2007-04-24
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-09
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.