2DNX | pdb_00002dnx

Solution structure of RSGI RUH-063, an N-terminal domain of Syntaxin 12 from human cDNA

PDB DOI: https://doi.org/10.2210/pdb2DNX/pdb

Classification: TRANSPORT PROTEIN
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2006-04-26 Released: 2006-10-26
Deposition Author(s): Abe, T., Hirota, H., Muto, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function, structures with the lowest energy, structures with the least restraint violations

wwPDB Validation 3D Report Full Report

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This is version 1.4 of the entry. See complete history.

Literature

Solution structure of RSGI RUH-063, an N-terminal domain of Syntaxin 12 from human cDNA

Abe, T., Hirota, H., Muto, Y., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 14.35 kDa
Atom Count: 1,002
Modeled Residue Count: 130
Deposited Residue Count: 130
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Syntaxin-12	A	130	Homo sapiens	Mutation(s): 0 Gene Names: STX12
UniProt & NIH Common Fund Data Resources
Find proteins for Q86Y82 (Homo sapiens) Explore Q86Y82 Go to UniProtKB: Q86Y82
PHAROS: Q86Y82 GTEx: ENSG00000117758
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q86Y82
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function, structures with the lowest energy, structures with the least restraint violations

Structure Validation

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Entry History

Deposition Data

Released Date: 2006-10-26

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2006-10-26
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-09
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.