2CY6
Crystal structure of ConM in complex with trehalose and maltose
- PDB DOI: https://doi.org/10.2210/pdb2CY6/pdb
- Classification: METAL BINDING PROTEIN
- Organism(s): Canavalia rosea
- Mutation(s): No 
- Deposited: 2005-07-05 Released: 2006-06-13 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.239 
- R-Value Work: 0.185 
- R-Value Observed: 0.187 
wwPDB Validation   3D Report Full Report
This is version 2.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Lectin | A, B [auth D] | 237 | Canavalia rosea | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P81460 (Canavalia lineata) Explore P81460  Go to UniProtKB:  P81460 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P81460 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Small Molecules
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MN Query on MN | E [auth A], G [auth D] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N | |||
CA Query on CA | F [auth A], H [auth D] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Biologically Interesting Molecules (External Reference) 1 Unique
Entity ID: 2 | |||||
---|---|---|---|---|---|
ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_900006 Query on PRD_900006 | C [auth B], D [auth C] | trehalose | Oligosaccharide / Nutrient |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.239 
- R-Value Work: 0.185 
- R-Value Observed: 0.187 
- Space Group: P 21 21 2
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 67.033 | α = 90 |
b = 97.332 | β = 90 |
c = 71.086 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
Entry History 
Deposition Data
- Released Date: 2006-06-13  Deposition Author(s): Cavada, B.S., Azevedo Jr., W.F., Delatorre, P., Rocha, B.A.M., Souza, E.P., Gadelha, C.A.A.
Revision History (Full details and data files)
- Version 1.0: 2006-06-13
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Atomic model, Data collection, Derived calculations, Non-polymer description, Structure summary - Version 2.1: 2024-03-13
Changes: Data collection, Database references, Structure summary