2CUY | pdb_00002cuy

Crystal structure of malonyl CoA-acyl carrier protein transacylase from Thermus thermophilus HB8

• PDB DOI: https://doi.org/10.2210/pdb2CUY/pdb

• Classification: TRANSFERASE
• Organism(s): Thermus thermophilus HB8
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2005-05-31 Released: 2006-06-13 
• Deposition Author(s): Misaki, S., Suzuki, K., Kunishima, N., Sugawara, M., Kuroishi, C., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free: 
  0.258 (Depositor), 0.260 (DCC) 
• R-Value Work: 
  0.226 (Depositor), 0.230 (DCC) 
• R-Value Observed: 
  0.226 (Depositor) 

Starting Model: experimental

Literature

Crystal structure of malonyl CoA-acyl carrier protein transacylase from Thermus thermophilus HB8

Misaki, S., Suzuki, K., Kunishima, N., Sugawara, M., Kuroishi, C.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 66.86 kDa 
• Atom Count: 5,374 
• Modeled Residue Count: 610 
• Deposited Residue Count: 610 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Malonyl CoA-[acyl carrier protein] transacylase	A, B	305	Thermus thermophilus HB8	Mutation(s): 0  EC: 2.3.1.39
UniProt
Find proteins for Q5SL77 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SL77  Go to UniProtKB:  Q5SL77

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free:  0.258 (Depositor), 0.260 (DCC) 
• R-Value Work:  0.226 (Depositor), 0.230 (DCC) 
• R-Value Observed: 0.226 (Depositor) 

Space Group: P 3₂ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 121.907	α = 90
b = 121.907	β = 90
c = 114.916	γ = 120

Software Package:

Software Name	Purpose
CNS	refinement
HKL-2000	data reduction
HKL-2000	data scaling
CCP4	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2006-06-13 
Deposition Author(s): Misaki, S., Suzuki, K., Kunishima, N., Sugawara, M., Kuroishi, C., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2006-06-13
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Source and taxonomy, Version format compliance
• Version 1.3: 2023-10-25
  Changes: Data collection, Database references, Refinement description