2CLS

The crystal structure of the human RND1 GTPase in the active GTP bound state


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.31 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.205 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The Crystal Structure of the Human Rnd1 Gtpase in the Active GTP Bound State

Pike, A.C.W.Yang, X.Colebrook, S.Gileadi, O.Sobott, F.Bray, J.Wen Hwa, L.Marsden, B.Zhao, Y.Schoch, G.Elkins, J.Debreczeni, J.E.Turnbull, A.P.von Delft, F.Arrowsmith, C.Edwards, A.Weigelt, J.Sundstrom, M.Doyle, D.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
RHO-RELATED GTP-BINDING PROTEIN RHO6
A, B
198Homo sapiensMutation(s): 0 
Gene Names: RND1 (RHO6)
Find proteins for Q92730 (Homo sapiens)
Go to Gene View: RND1
Go to UniProtKB:  Q92730
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GTP
Query on GTP

Download SDF File 
Download CCD File 
A, B
GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
A, B
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.31 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.205 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 67.168α = 90.00
b = 67.762β = 90.00
c = 206.409γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2006-05-04
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Refinement description, Version format compliance
  • Version 1.2: 2018-01-24
    Type: Database references, Structure summary