Biological Assembly 1  

 3D View: Structure | 1D-3D View | Validation Report

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 2.14 kDa 
• Atom Count: 148 
• Modelled Residue Count: 19 
• Deposited Residue Count: 19 
• Unique protein chains: 1

2CFJ

Phosphorylation of the Cytoplasmic Tail of Tissue Factor and its Role in Modulating Structure and Binding Affinity

• PDB DOI: 10.2210/pdb2CFJ/pdb
• BMRB: 6998

• Classification: BLOOD CLOTTING
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2006-02-21 Released: 2007-03-20 
• Deposition Author(s): Sen, M., Agrawal, S., Craft, J.W., Ruf, W., Legge, G.B.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 10 
• Selection Criteria: LOWEST POTENTIAL ENERGY ENSEMBLES 

Literature

Spectroscopic Characterization of Successive Phosphorylation of the Tissue Factor Cytoplasmic Region.

Sen, M., Herzik, M., Craft, J.W., Creath, A.L., Agrawal, S., Ruf, W., Legge, G.B.

(2009) Open Spectrosc J 3: 58

• PubMed: 20076769 
• DOI: 10.2174/1874383800903010058
• Primary Citation of Related Structures:  
  2CEF, 2CEH, 2CEZ, 2CFJ


• PubMed Abstract: 
  

Tissue Factor (TF) is well known for its role during the activation of the coagulation pathway, but it is also critical for tumor biology and inflammation through protease activated receptor (PAR) 2 signaling. This signaling function is modulated by the successive phosphorylation of residues Ser253 and Ser258 within the TF cytoplasmic region (TFCR). This paper reports how we used NMR and spectroscopic methods to investigate the structural propensities of the unphosphorylated and phosphorylated forms of the TFCR. When unphosphorylated, the TFCR forms a local hydrophobic collapse around Trp254 and an electropositive patch from the membrane proximal basic block (Arg246-Lys247) to the conserved PKCalpha consensus residue Lys255. Phosphorylation of Ser253 alters the charge characteristics of this membrane proximal region, thereby strengthening the interaction between residue Ala248 and the Trp254 aromatic group. Phosphorylation of the Ser258-Pro259 motif destabilizes a turn at the C-terminus to form an extended polyproline helical motif. Our data suggests that by changing both its charge and local structural propensity, covalent modifications of the TFCR can potentially regulate its association with the cellular membrane and its signaling partners.

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Organizational Affiliation: 

University of Houston, Department of Biology and Biochemistry, Houston, TX 77204-5001, USA.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
TISSUE FACTOR	A	19	Homo sapiens	Mutation(s): 0  Gene Names: F3
UniProt & NIH Common Fund Data Resources
Find proteins for P13726 (Homo sapiens) Explore P13726  Go to UniProtKB:  P13726
PHAROS:  P13726 GTEx:  ENSG00000117525

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
SEP	A	L-PEPTIDE LINKING	C3 H8 N O6 P		SER

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 10 
• Selection Criteria: LOWEST POTENTIAL ENERGY ENSEMBLES 
• OLDERADO: 2CFJ Olderado

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2006-02-21 
• Released Date: 2007-03-20 
Deposition Author(s): Sen, M., Agrawal, S., Craft, J.W., Ruf, W., Legge, G.B.

Revision History  

• Version 1.0: 2007-03-20
  Type: Initial release
  
• Version 1.1: 2012-12-05
  Changes: Atomic model, Database references, Derived calculations, Non-polymer description, Other, Structure summary, Version format compliance
• Version 2.0: 2019-10-02
  Changes: Atomic model, Data collection, Derived calculations, Other