2C4P

Crystal structure of human ubiquitin-conjugating enzyme UbcH5A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.232 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structures of Two Human Ubiquitin-Conjugating Enzymes from Twinned Crystals

Dodd, R.B.Read, R.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
UBIQUITIN-CONJUGATING ENZYME E2 D1
A, B
165Homo sapiensMutation(s): 0 
Gene Names: UBE2D1 (SFT, UBC5A, UBCH5, UBCH5A)
EC: 2.3.2.23
Find proteins for P51668 (Homo sapiens)
Go to Gene View: UBE2D1
Go to UniProtKB:  P51668
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.232 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 45.621α = 90.00
b = 50.565β = 90.00
c = 66.043γ = 90.00
Software Package:
Software NamePurpose
CNSrefinement
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2005-10-21 
  • Released Date: 2006-11-22 
  • Deposition Author(s): Dodd, R.B., Read, R.J.

Revision History 

  • Version 1.0: 2006-11-22
    Type: Initial release
  • Version 1.1: 2011-05-08
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance