2BUJ

Crystal structure of the human Serine-threonine Kinase 16 in complex with staurosporine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free: 0.229 
  • R-Value Work: 0.185 
  • R-Value Observed: 0.187 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Crystal Structure of the Human Serine-Threonine Kinase 16 in Complex with Staurosporine

Debreczeni, J.E.Eswaran, J.Bullock, A.Filippakopoulos, P.Kavanagh, K.Amos, A.Fedorov, O.Sobott, F.Ball, L.J.von Delft, F.Arrowsmith, C.Sundstrom, M.Edwards, A.Knapp, S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
SERINE/THREONINE-PROTEIN KINASE 16AB317Homo sapiensMutation(s): 2 
Gene Names: STK16MPSK1PKL12TSF1
EC: 2.7.1.37 (PDB Primary Data), 2.7.11.1 (UniProt), 2.7.10.2 (UniProt)
Find proteins for O75716 (Homo sapiens)
Explore O75716 
Go to UniProtKB:  O75716
NIH Common Fund Data Resources
PHAROS  O75716
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
STU
Query on STU

Download CCD File 
A, B
STAUROSPORINE
C28 H26 N4 O3
HKSZLNNOFSGOKW-FYTWVXJKSA-N
 Ligand Interaction
CL
Query on CL

Download CCD File 
A, B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
STOKd:  200   nM  BindingDB
STOKd:  27   nM  BindingDB
STOKd:  270   nM  BindingDB
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free: 0.229 
  • R-Value Work: 0.185 
  • R-Value Observed: 0.187 
  • Space Group: C 2 2 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 104.554α = 90
b = 168.901β = 90
c = 129.729γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2005-07-05
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Advisory, Refinement description, Version format compliance
  • Version 1.2: 2018-01-24
    Changes: Database references, Structure summary
  • Version 1.3: 2019-04-10
    Changes: Data collection, Source and taxonomy
  • Version 1.4: 2019-05-08
    Changes: Data collection, Experimental preparation