2BSP

BACILLUS SUBTILIS PECTATE LYASE R279K MUTANT


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.196 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

The Conserved Arginine Proximal to the Essential Calcium of Bacillus Subtilis Pectate Lyase Stabilizes the Transition State

Pickersgill, R.Worboys, K.Scott, M.Cummings, N.Cooper, A.Jenkins, J.Smith, D.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PROTEIN (PECTATE LYASE)
A
420Bacillus subtilis (strain 168)Mutation(s): 1 
Gene Names: pel
EC: 4.2.2.2
Find proteins for P39116 (Bacillus subtilis (strain 168))
Go to UniProtKB:  P39116
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download SDF File 
Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.196 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 51.430α = 90.00
b = 69.710β = 112.65
c = 60.230γ = 90.00
Software Package:
Software NamePurpose
ROTAVATAdata scaling
CCP4data scaling
X-PLORmodel building
DENZOdata reduction
REFMACrefinement
X-PLORphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 1998-07-31 
  • Released Date: 1998-08-12 
  • Deposition Author(s): Pickersgill, R.

Revision History 

  • Version 1.0: 1998-08-12
    Type: Initial release
  • Version 1.1: 2007-10-16
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2017-10-04
    Type: Refinement description