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Download EndnoteCrystal structure of DNA polymerase III, beta chain (EC 2.7.7.7) (np_344555.1) from STREPTOCOCCUS PNEUMONIAE TIGR4 at 2.50 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
2AWA
Crystal structure of DNA polymerase III, beta chain (EC 2.7.7.7) (np_344555.1) from STREPTOCOCCUS PNEUMONIAE TIGR4 at 2.50 A resolution
- DOI: 10.2210/pdb2AWA/pdb
- Classification: TRANSFERASE
- Organism(s): Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
- Expression System: Escherichia coli
- Deposited: 2005-08-31 Released: 2005-09-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.5 Å
- R-Value Free: 0.250
- R-Value Work: 0.192
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| DNA polymerase III, beta chain | A, B, C, D | 390 | Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) | Mutation(s): 0 Gene Names: dnaN |
Find proteins for O06672 (Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)) Go to UniProtKB: O06672 | ||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | A | GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.5 Å
- R-Value Free: 0.250
- R-Value Work: 0.192
- Space Group: P 1 21 1
- Diffraction Data DOI:
10.18430/M32AWA Protein Diffraction
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 94.060 | α = 90.00 |
| b = 70.720 | β = 91.04 |
| c = 135.440 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| MOLREP | phasing |
| SHELXD | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| XSCALE | data scaling |
| autoSHARP | phasing |
| XDS | data reduction |
Entry History
Deposition Data
- Deposited Date: 2005-08-31
- Released Date: 2005-09-20
- Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History
- Version 1.0: 2005-09-20
Type: Initial release - Version 1.1: 2008-05-01
Type: Version format compliance - Version 1.2: 2011-07-13
Type: Advisory, Source and taxonomy, Version format compliance
