2A98

Crystal structure of the catalytic domain of human inositol 1,4,5-trisphosphate 3-kinase C


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.218 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

The crystal structure of the catalytic domain of human inositol 1,4,5-trisphosphate 3-kinase C

Hallberg, B.M.Ogg, D.Arrowsmith, C.Edwards, A.Ehn, M.Graslund, S.Hammarstrom, M.Kotenyova, T.Nilsson-Ehle, P.Nordlund, P.Persson, C.Sagemark, J.Schuler, H.Stenmark, P.Thorsell, A.-G.Sundstrom, M.Weigelt, J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Inositol 1,4,5-trisphosphate 3-kinase C
A
259Homo sapiensMutation(s): 0 
Gene Names: ITPKC (IP3KC)
EC: 2.7.1.127
Find proteins for Q96DU7 (Homo sapiens)
Go to Gene View: ITPKC
Go to UniProtKB:  Q96DU7
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
I3P
Query on I3P

Download SDF File 
Download CCD File 
A
D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE
C6 H15 O15 P3
MMWCIQZXVOZEGG-XJTPDSDZSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.218 
  • Space Group: P 61 2 2
Unit Cell:
Length (Å)Angle (°)
a = 87.720α = 90.00
b = 87.720β = 90.00
c = 174.940γ = 120.00
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement
XSCALEdata scaling
MAR345data collection
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2005-07-19
    Type: Initial release
  • Version 1.1: 2008-04-30
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Advisory, Refinement description, Version format compliance
  • Version 1.3: 2017-10-11
    Type: Refinement description