Structure of an intermediate for nucleotide exchange by Ras
Nassar, N., Skowronek, K.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Transforming protein p21/H-Ras-1 | 166 | Homo sapiens | Mutation(s): 2  Gene Names: HRAS, HRAS1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01112 (Homo sapiens) Explore P01112  Go to UniProtKB:  P01112 | |||||
PHAROS:  P01112 GTEx:  ENSG00000174775  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01112 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GDP Query on GDP | D [auth A] | GUANOSINE-5'-DIPHOSPHATE C10 H15 N5 O11 P2 QGWNDRXFNXRZMB-UUOKFMHZSA-N | |||
MG Query on MG | B [auth A], C [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
CSX Query on CSX | A | L-PEPTIDE LINKING | C3 H7 N O3 S | CYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 93.64 | α = 90 |
b = 93.64 | β = 90 |
c = 121.56 | γ = 120 |
Software Name | Purpose |
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CNS | refinement |
DENZO | data reduction |
SCALEPACK | data scaling |
AMoRE | phasing |