1VLG

Crystal structure of Ferritin (TM1128) from Thermotoga maritima at 2.00 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.218 
  • R-Value Work: 0.178 
  • R-Value Observed: 0.180 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Crystal structure of Ferritin (TM1128) from Thermotoga maritima at 2.00 A resolution

Joint Center for Structural Genomics (JCSG)

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
ferritinA, B, C, D, E, F, G, H176Thermotoga maritima MSB8Mutation(s): 0 
Gene Names: TM1128TM_1128
EC: 1.16.3.2
Find proteins for Q9X0L2 (Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099))
Explore Q9X0L2 
Go to UniProtKB:  Q9X0L2
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download Ideal Coordinates CCD File 
AA [auth E] , BA [auth E] , FA [auth F] , J [auth A] , K [auth A] , L [auth A] , LA [auth H] , M [auth A] , 
AA [auth E],  BA [auth E],  FA [auth F],  J [auth A],  K [auth A],  L [auth A],  LA [auth H],  M [auth A],  O [auth B],  P [auth B],  Q [auth B],  U [auth C],  X [auth D],  Y [auth D]
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
GOL
Query on GOL

Download Ideal Coordinates CCD File 
CA [auth E] , DA [auth E] , GA [auth F] , HA [auth F] , JA [auth G] , MA [auth H] , R [auth B] , S [auth B] , 
CA [auth E],  DA [auth E],  GA [auth F],  HA [auth F],  JA [auth G],  MA [auth H],  R [auth B],  S [auth B],  V [auth C]
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
FE
Query on FE

Download Ideal Coordinates CCD File 
EA [auth F], I [auth A], IA [auth G], KA [auth H], N [auth B], T [auth C], W [auth D], Z [auth E]FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 175.634α = 90
b = 175.634β = 90
c = 354.843γ = 120
Software Package:
Software NamePurpose
REFMACrefinement
SCALAdata scaling
CNSrefinement
MOLREPphasing
MOSFLMdata reduction
CCP4data scaling
CNSphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2004-08-17
    Type: Initial release
  • Version 1.1: 2008-04-26
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Advisory, Derived calculations, Refinement description, Source and taxonomy, Version format compliance
  • Version 1.3: 2017-10-11
    Changes: Data collection
  • Version 1.4: 2019-07-24
    Changes: Data collection, Refinement description