1S31

Crystal Structure Analysis of the human Tub protein (isoform a) spanning residues 289 through 561


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.70 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.181 
  • R-Value Observed: 0.184 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

A novel human obesity and sensory deficit syndrome resulting from a mutation in the TUB gene

Boutboul, S.Carroll, K.J.Basdevant, A.Gomez, C.Nandrot, E.Clement, K.Shapiro, L.Abitbol, M.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
tubby isoform aA273Homo sapiensMutation(s): 0 
Gene Names: TUB
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P50607 (Homo sapiens)
Explore P50607 
Go to UniProtKB:  P50607
PHAROS:  P50607
GTEx:  ENSG00000166402 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP50607
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PGE
Query on PGE

Download Ideal Coordinates CCD File 
B [auth A]TRIETHYLENE GLYCOL
C6 H14 O4
ZIBGPFATKBEMQZ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.70 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.181 
  • R-Value Observed: 0.184 
  • Space Group: I 2 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 149.981α = 90
b = 149.981β = 90
c = 149.981γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing
REFMACrefinement

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2005-01-25
    Type: Initial release
  • Version 1.1: 2008-04-29
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Advisory, Derived calculations, Version format compliance
  • Version 1.3: 2017-10-11
    Changes: Refinement description