Macromolecule Content

• Total Structure Weight: 6.36 kDa 
• Atom Count: 900 
• Residue Count: 58 
• Unique protein chains: 1

1NZ9

Solution Structure of the N-utilization substance G (NusG) C-terminal (NGC) domain from Thermus thermophilus

• DOI: 10.2210/pdb1NZ9/pdb

• Classification: TRANSCRIPTION
• Organism(s): Thermus thermophilus
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2003-02-17 Released: 2004-04-06 
• Deposition Author(s): Reay, P., Yamasaki, K., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 90 
• Conformers Submitted: 31 
• Selection Criteria: structures with the lowest energy, NONE WITH DISTANCE VIOLATIONS > 0.2 ANGSTROMS, NONE WITH DIHEDRAL ANGLE RESTRAINT VIOLATIONS > 2 DEGREES 

Literature

Structural and sequence comparisons arising from the solution structure of the transcription elongation factor NusG from Thermus thermophilus

Reay, P., Yamasaki, K., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S.

(2004) Proteins 56: 40-51

• PubMed: 15162485 
• DOI: 10.1002/prot.20054
• Structures With Same Primary Citation


• PubMed Abstract: 
  

NusG is an essential bacterial protein modulator of transcriptional elongation and termination events, and interacts directly with RNA polymerase and Rho protein. Found also in Archaea, NusG shows stretches of sequence similarity to the eukaryotic transcription elongation factor Spt5. Herein, the three-dimensional solution structure of the bacterial NusG from Thermus thermophilus, which shows 43% amino acid sequence similarity to the Escherichia coli NusG, is described, and a survey of NusG and Spt5 amino acid sequences is presented. Although there is a clear evolutionary and functional relationship between these proteins, it is evident from the structural, sequence, and biochemical data that their binding specificities to both nucleic acids and other proteins differ.

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Organizational Affiliation: 

Age Dimension Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Japan.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
TRANSCRIPTION ANTITERMINATION PROTEIN NUSG	A	58	Thermus thermophilus	Mutation(s): 0  Gene Names: nusG
Find proteins for P35872 (Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)) Go to UniProtKB:  P35872

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 90 
• Conformers Submitted: 31 
• Selection Criteria: structures with the lowest energy, NONE WITH DISTANCE VIOLATIONS > 0.2 ANGSTROMS, NONE WITH DIHEDRAL ANGLE RESTRAINT VIOLATIONS > 2 DEGREES 
• OLDERADO: 1NZ9 Olderado

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2003-02-17 
• Released Date: 2004-04-06 
Deposition Author(s): Reay, P., Yamasaki, K., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History 

• Version 1.0: 2004-04-06
  Type: Initial release
  
• Version 1.1: 2008-04-29
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance