Download MendeleyHigh resolution structure of the Cd substituted BcII from Bacillus cereus
Garcia-Saez, I., Chantalat, L., Dideberg, O.To be published.
1MQO
Metallo-beta-lactamase BcII Cd substituted from Bacillus cereus at 1.35 angstroms resolution
- PDB DOI: https://doi.org/10.2210/pdb1MQO/pdb
- Classification: HYDROLASE
- Organism(s): Bacillus cereus
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2002-09-17 Released: 2004-05-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.35 Å
- R-Value Free: 0.248
- R-Value Work: 0.222
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Beta-lactamase II | 227 | Bacillus cereus | Mutation(s): 0 Gene Names: BLM EC: 3.5.2.6 |  | |
UniProt | |||||
Find proteins for P04190 (Bacillus cereus) Explore P04190 Go to UniProtKB: P04190 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P04190 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CIT Query on CIT | E [auth A] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N |  | ||
| CD Query on CD | B [auth A], C [auth A], D [auth A] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.35 Å
- R-Value Free: 0.248
- R-Value Work: 0.222
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 53.26 | α = 90 |
| b = 61.38 | β = 93.24 |
| c = 69.65 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| AMoRE | phasing |
| CNS | refinement |
Entry History
Deposition Data
- Released Date: 2004-05-18 Deposition Author(s): Garcia-Saez, I., Chantalat, L., Dideberg, O.
Revision History (Full details and data files)
- Version 1.0: 2004-05-18
Type: Initial release - Version 1.1: 2008-04-28
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2024-02-14
Changes: Data collection, Database references, Derived calculations, Refinement description
