1KNB

CRYSTAL STRUCTURE OF THE RECEPTOR-BINDING DOMAIN OF ADENOVIRUS TYPE 5 FIBER PROTEIN AT 1.7 ANGSTROMS RESOLUTION


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Work: 0.158 
  • R-Value Observed: 0.158 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal structure of the receptor-binding domain of adenovirus type 5 fiber protein at 1.7 A resolution.

Xia, D.Henry, L.J.Gerard, R.D.Deisenhofer, J.

(1994) Structure 2: 1259-1270

  • DOI: 10.1016/s0969-2126(94)00126-x
  • Structures With Same Primary Citation

  • PubMed Abstract: 
  • Adenoviral infection begins with the binding of virion to the surface of host cells. Specific attachment is achieved through interactions between host-cell receptors and the adenovirus fiber protein and is mediated by the globular carboxy-terminal do ...

    Adenoviral infection begins with the binding of virion to the surface of host cells. Specific attachment is achieved through interactions between host-cell receptors and the adenovirus fiber protein and is mediated by the globular carboxy-terminal domain of the adenovirus fiber protein, termed the carboxy-terminal knob domain.


    Related Citations: 
    • Characterization of the Knob Domain of the Adenovirus Type 5 Fiber Protein Expressed in Escherichia Coli
      Henry, L.J., Xia, D., Wilke, M.E., Deisenhofer, J., Gerard, R.D.
      (1994) J Virol 68: 5239
    • Structure of Adenovirus Fiber: Morphology of Single Fibers
      Ruigrok, R.W.H., Barge, A., Albiges-Rizo, C., Dayan, S.
      (1994) J Mol Biol 215: 589

    Organizational Affiliation

    Howard Hughes Medical Institute, University of Texas Southwestern Medical Center at Dallas 75235-9050.



Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
ADENOVIRUS TYPE 5 FIBER PROTEINA196Human adenovirus 5Mutation(s): 0 
Gene Names: L5
Find proteins for P11818 (Human adenovirus C serotype 5)
Explore P11818 
Go to UniProtKB:  P11818
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Work: 0.158 
  • R-Value Observed: 0.158 
  • Space Group: P 21 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 86.4α = 90
b = 86.4β = 90
c = 86.4γ = 90
Software Package:
Software NamePurpose
X-PLORmodel building
X-PLORrefinement
X-PLORphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1995-03-31
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance