1KNB

CRYSTAL STRUCTURE OF THE RECEPTOR-BINDING DOMAIN OF ADENOVIRUS TYPE 5 FIBER PROTEIN AT 1.7 ANGSTROMS RESOLUTION


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Work: 0.158 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of the receptor-binding domain of adenovirus type 5 fiber protein at 1.7 A resolution.

Xia, D.Henry, L.J.Gerard, R.D.Deisenhofer, J.

(1994) Structure 2: 1259-1270


  • PubMed Abstract: 
  • Adenoviral infection begins with the binding of virion to the surface of host cells. Specific attachment is achieved through interactions between host-cell receptors and the adenovirus fiber protein and is mediated by the globular carboxy-terminal do ...

    Adenoviral infection begins with the binding of virion to the surface of host cells. Specific attachment is achieved through interactions between host-cell receptors and the adenovirus fiber protein and is mediated by the globular carboxy-terminal domain of the adenovirus fiber protein, termed the carboxy-terminal knob domain.


    Related Citations: 
    • Characterization of the Knob Domain of the Adenovirus Type 5 Fiber Protein Expressed in Escherichia Coli
      Henry, L.J.,Xia, D.,Wilke, M.E.,Deisenhofer, J.,Gerard, R.D.
      (1994) J.Virol. 68: 5239
    • Structure of Adenovirus Fiber: Morphology of Single Fibers
      Ruigrok, R.W.H.,Barge, A.,Albiges-Rizo, C.,Dayan, S.
      (1994) J.Mol.Biol. 215: 589


    Organizational Affiliation

    Howard Hughes Medical Institute, University of Texas Southwestern Medical Center at Dallas 75235-9050.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
ADENOVIRUS TYPE 5 FIBER PROTEIN
A
196Human adenovirus C serotype 5N/A
Find proteins for P11818 (Human adenovirus C serotype 5)
Go to UniProtKB:  P11818
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Work: 0.158 
  • Space Group: P 21 3
Unit Cell:
Length (Å)Angle (°)
a = 86.400α = 90.00
b = 86.400β = 90.00
c = 86.400γ = 90.00
Software Package:
Software NamePurpose
X-PLORmodel building
X-PLORphasing
X-PLORrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1995-03-31
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance