1HH3

Decaplanin first P21-Form


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.00 Å
  • R-Value Free: 0.148 
  • R-Value Observed: 0.115 

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This is version 3.0 of the entry. See complete history


Literature

Structures of Four Crystal Forms of Decaplanin

Lehmann, C.Debreczeni, J.E.Bunkoczi, G.Dauter, M.Dauter, Z.Vertesy, L.Sheldrick, G.M.

(2003) Helv Chim Acta 86: 1478


Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
DECAPLANIN
A, B, C, D
7uncultured actinomyceteMutation(s): 0 
Glycosylation
Glycosylation Sites: 1
Sequence Annotations
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  • Reference Sequence
Oligosaccharides

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Entity ID: 2
MoleculeChains Length2D Diagram Glycosylation3D Interactions
alpha-L-rhamnopyranose-(1-2)-beta-D-glucopyranose
E, F, G, H
2N/A
Glycosylation Resources
GlyTouCan:  G13233ZQ
GlyCosmos:  G13233ZQ
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
OMX
Query on OMX
A, B, C, D
L-PEPTIDE LINKINGC9 H11 N O4TYR
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.00 Å
  • R-Value Free: 0.148 
  • R-Value Observed: 0.115 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 25.604α = 90
b = 38.598β = 105.88
c = 31.713γ = 90
Software Package:
Software NamePurpose
SHELXL-97refinement
DENZOdata reduction
SCALEPACKdata scaling
SHELXDphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2005-07-11
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Atomic model, Database references, Derived calculations, Structure summary, Version format compliance
  • Version 1.2: 2012-07-11
    Changes: Other
  • Version 1.3: 2012-11-30
    Changes: Other
  • Version 1.4: 2013-05-01
    Changes: Non-polymer description
  • Version 2.0: 2019-04-24
    Changes: Data collection, Derived calculations, Other, Polymer sequence
  • Version 3.0: 2020-07-29
    Type: Remediation
    Reason: Carbohydrate remediation
    Changes: Atomic model, Data collection, Derived calculations, Other, Structure summary