1EI3

CRYSTAL STRUCTURE OF NATIVE CHICKEN FIBRINOGEN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.50 Å

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal structure of native chicken fibrinogen at 5.5-A resolution.

Yang, Z.Mochalkin, I.Veerapandian, L.Riley, M.Doolittle, R.F.

(2000) Proc Natl Acad Sci U S A 97: 3907-3912

  • DOI: 10.1073/pnas.080065697
  • Primary Citation of Related Structures:  
    1EI3

  • PubMed Abstract: 
  • The crystal structure of native chicken fibrinogen has been determined at a resolution of 5.5 A. The full-length molecule is 460 A in length and sigmoidally shaped. The structure includes the full sweep of the coiled coils that connect the central and terminal domains; the chain paths of the central domain confirm a predicted scheme of planar disulfide rings in apposition with each other ...

    The crystal structure of native chicken fibrinogen has been determined at a resolution of 5.5 A. The full-length molecule is 460 A in length and sigmoidally shaped. The structure includes the full sweep of the coiled coils that connect the central and terminal domains; the chain paths of the central domain confirm a predicted scheme of planar disulfide rings in apposition with each other. Electron density maps have revealed the outlines of disordered alphaC domains nestled within the confines of the sinuous coiled coils. The amino-terminal segments of the alpha- and beta-chains, including the fibrinopeptides A and B, are also disordered.


    Related Citations: 
    • Crystal Structures of Fragment D from Human Fibrinogen and its Crosslinked Countepart from Fibrin
      Spraggon, G., Everse, S.J., Doolittle, R.F.
      (1997) Nature 389: 455
    • Crystal Structure of Fragment Double-D from Human Fibrin with Two Different Bound Ligands
      Everse, S.J., Spraggon, G., Veerapandian, L., Riley, M., Doolittle, R.F.
      (1998) Biochemistry 37: 8637

    Organizational Affiliation

    Center for Molecular Genetics, University of California, San Diego, La Jolla, CA 92093-0634, USA.



Macromolecules
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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
FIBRINOGENA, D491Gallus gallusMutation(s): 0 
Gene Names: FGA
UniProt
Find proteins for P14448 (Gallus gallus)
Explore P14448 
Go to UniProtKB:  P14448
Protein Feature View
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  • Reference Sequence
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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
FIBRINOGENB, E464Gallus gallusMutation(s): 0 
Gene Names: FGB
UniProt
Find proteins for Q02020 (Gallus gallus)
Explore Q02020 
Go to UniProtKB:  Q02020
Protein Feature View
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  • Reference Sequence
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Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
FIBRINOGENC, F409Gallus gallusMutation(s): 0 
UniProt
Find proteins for O93568 (Gallus gallus)
Explore O93568 
Go to UniProtKB:  O93568
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.50 Å
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 114.726α = 90
b = 101.849β = 106.71
c = 210.232γ = 90
Software Package:
Software NamePurpose
AMoREphasing
DENZOdata reduction
SCALEPACKdata scaling

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2000-05-10
    Type: Initial release
  • Version 1.1: 2008-04-27
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance