1EI3

CRYSTAL STRUCTURE OF NATIVE CHICKEN FIBRINOGEN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.5 Å

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of native chicken fibrinogen at 5.5-A resolution.

Yang, Z.Mochalkin, I.Veerapandian, L.Riley, M.Doolittle, R.F.

(2000) Proc.Natl.Acad.Sci.USA 97: 3907-3912

  • DOI: 10.1073/pnas.080065697

  • PubMed Abstract: 
  • The crystal structure of native chicken fibrinogen has been determined at a resolution of 5.5 A. The full-length molecule is 460 A in length and sigmoidally shaped. The structure includes the full sweep of the coiled coils that connect the central an ...

    The crystal structure of native chicken fibrinogen has been determined at a resolution of 5.5 A. The full-length molecule is 460 A in length and sigmoidally shaped. The structure includes the full sweep of the coiled coils that connect the central and terminal domains; the chain paths of the central domain confirm a predicted scheme of planar disulfide rings in apposition with each other. Electron density maps have revealed the outlines of disordered alphaC domains nestled within the confines of the sinuous coiled coils. The amino-terminal segments of the alpha- and beta-chains, including the fibrinopeptides A and B, are also disordered.


    Related Citations: 
    • Crystal Structure of Fragment Double-D from Human Fibrin with Two Different Bound Ligands
      Everse, S.J.,Spraggon, G.,Veerapandian, L.,Riley, M.,Doolittle, R.F.
      (1998) Biochemistry 37: 8637
    • Crystal Structures of Fragment D from Human Fibrinogen and its Crosslinked Countepart from Fibrin
      Spraggon, G.,Everse, S.J.,Doolittle, R.F.
      (1997) Nature 389: 455


    Organizational Affiliation

    Center for Molecular Genetics, University of California, San Diego, La Jolla, CA 92093-0634, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
FIBRINOGEN
A, D
491Gallus gallusMutation(s): 0 
Gene Names: FGA
Find proteins for P14448 (Gallus gallus)
Go to Gene View: FGA
Go to UniProtKB:  P14448
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
FIBRINOGEN
B, E
464Gallus gallusMutation(s): 0 
Gene Names: FGB
Find proteins for Q02020 (Gallus gallus)
Go to Gene View: FGB
Go to UniProtKB:  Q02020
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
FIBRINOGEN
C, F
409Gallus gallusMutation(s): 0 
Find proteins for O93568 (Gallus gallus)
Go to UniProtKB:  O93568
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.5 Å
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 114.726α = 90.00
b = 101.849β = 106.71
c = 210.232γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
AMoREphasing
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2000-05-10
    Type: Initial release
  • Version 1.1: 2008-04-27
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance