Crystal Structure of Human Mmp-2 Reveals a New P
Bergmann, U., Tuuttila, A., Morgunova, E., Tryggvason, K.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
72 KDA TYPE IV COLLAGENASE | 421 | Homo sapiens | Mutation(s): 1  EC: 3.4.24.24 Membrane Entity: Yes  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P08253 (Homo sapiens) Explore P08253  Go to UniProtKB:  P08253 | |||||
PHAROS:  P08253 GTEx:  ENSG00000087245  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P08253 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
INHIBITOR PEPTIDE | E [auth P], F [auth R] | 8 | synthetic construct | Mutation(s): 0  | |
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | G [auth A] L [auth B] M [auth B] R [auth C] S [auth C] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
ZN Query on ZN | H [auth A] I [auth A] N [auth B] O [auth B] T [auth C] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
CA Query on CA | AA [auth D] BA [auth D] J [auth A] K [auth A] P [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 117.67 | α = 90 |
b = 166.15 | β = 90 |
c = 170.13 | γ = 90 |
Software Name | Purpose |
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CNS | refinement |
XDS | data reduction |
ROTAPREP | data scaling |
SCALA | data scaling |
AMoRE | phasing |