1ZQ9

Crystal structure of human Dimethyladenosine transferase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.164 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of human Dimethyladenosine transferase with SAM

Wu, H.Dong, A.Zeng, H.Loppnau, P.Sundstrom, M.Arrowsmith, C.Edwards, A.Bochkarev, A.Plotnikov, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Probable dimethyladenosine transferase
A, B
285Homo sapiensMutation(s): 0 
Gene Names: DIMT1 (DIMT1L)
EC: 2.1.1.183
Find proteins for Q9UNQ2 (Homo sapiens)
Go to Gene View: DIMT1
Go to UniProtKB:  Q9UNQ2
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SAM
Query on SAM

Download SDF File 
Download CCD File 
A, B
S-ADENOSYLMETHIONINE
C15 H22 N6 O5 S
MEFKEPWMEQBLKI-FCKMPRQPSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.164 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 39.629α = 90.00
b = 185.243β = 91.30
c = 45.072γ = 90.00
Software Package:
Software NamePurpose
SOLVEphasing
REFMACrefinement
ADSCdata collection
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2005-05-31
    Type: Initial release
  • Version 1.1: 2008-04-30
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance