1ZIS

Recombinant Lumazine synthase (hexagonal form)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.206 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

Crystal structure of recombinant Lumazine synthase (hexagonal form)

Lopez-Jaramillo, F.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
6,7-dimethyl-8-ribityllumazine synthase
A, B, C, D, E, F, G, H, I, J
154Bacillus subtilis (strain 168)Mutation(s): 0 
Gene Names: ribH
EC: 2.5.1.78
Find proteins for P11998 (Bacillus subtilis (strain 168))
Go to UniProtKB:  P11998
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A, B, C, D, F, G, H, I, J
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
INI
Query on INI

Download SDF File 
Download CCD File 
A, B, C, D, E, F, G, H, I, J
5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE
C9 H14 N4 O8
KSKGHNZSCSCHEQ-RPDRRWSUSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.206 
  • Space Group: P 63 2 2
Unit Cell:
Length (Å)Angle (°)
a = 153.690α = 90.00
b = 153.690β = 90.00
c = 296.300γ = 120.00
Software Package:
Software NamePurpose
XDSdata reduction
AMoREphasing
CNSrefinement
XDSdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2006-10-03
    Type: Initial release
  • Version 1.1: 2008-04-30
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2013-01-16
    Type: Other
  • Version 1.4: 2018-01-24
    Type: Database references