Biological Assembly 1  

 3D View: Structure | Electron Density | Ligand Interaction

Standalone Viewers  
Protein Workshop | Ligand Explorer

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 21802.99 
• Atom Count: 1349 
• Residue Count: 188 
• Unique protein chains: 1

1ZD9

Structure of human ADP-ribosylation factor-like 10B

• DOI: 10.2210/pdb1ZD9/pdb

• Classification: TRANSPORT PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21(DE3)


• Deposited: 2005-04-14 Released: 2005-05-17 
• Deposition Author(s): Choe, J., Atanassova, A., Arrowsmith, C., Edwards, A., Sundstrom, M., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.7 Å
• R-Value Free: 0.248 
• R-Value Work: 0.212 

Literature

Structure of human ADP-ribosylation factor-like 10B

Atanassova, A., Choe, J., Arrowsmith, C., Edwards, A., Sundstrom, M., Bochkarev, A., Park, H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
ADP-ribosylation factor-like 10B	A	188	Homo sapiens	Mutation(s): 0  Gene Names: ARL8A (ARL10B, GIE2)
Find proteins for Q96BM9 (Homo sapiens) Go to Gene View: ARL8A Go to UniProtKB:  Q96BM9

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions
GDP	A	GUANOSINE-5'-DIPHOSPHATE C10 H15 N5 O11 P2 QGWNDRXFNXRZMB-UUOKFMHZSA-N
MG	A	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.7 Å
• R-Value Free: 0.248 
• R-Value Work: 0.212 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length (Å)	Angle (°)
a = 61.731	α = 90.00
b = 72.092	β = 90.00
c = 36.416	γ = 90.00

Software Package:

Software Name	Purpose
CrystalClear	data reduction
REFMAC	refinement
MLPHARE	phasing
CrystalClear	data scaling

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2005-04-14 
• Released Date: 2005-05-17 
• Deposition Author(s): Choe, J., Atanassova, A., Arrowsmith, C., Edwards, A., Sundstrom, M., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)

Revision History 

• Version 1.0: 2005-05-17
  Type: Initial release
• Version 1.1: 2008-04-30
  Type: Version format compliance
• Version 1.2: 2011-07-13
  Type: Version format compliance