1Z0P | pdb_00001z0p

Crystal structure of the Protein of Unknown Function SPY1572 from Streptococcus pyogenes

PDB DOI: https://doi.org/10.2210/pdb1Z0P/pdb

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Streptococcus pyogenes M1 GAS
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2005-03-02 Released: 2005-04-19
Deposition Author(s): Zhang, R., Lezondra, L., Clancy, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free:
0.256 (Depositor), 0.264 (DCC)
R-Value Work:
0.220 (Depositor), 0.227 (DCC)
R-Value Observed:
0.220 (Depositor)

wwPDB Validation 3D Report Full Report

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This is version 1.3 of the entry. See complete history.

Literature

The 1.7A Crystal structure of the hypothetical protein SPy1572 from Streptococcus pyogenes

Zhang, R., Lezondra, L., Clancy, S., Collart, F., Joachimiak, A.

To be published.

Macromolecule Content

Total Structure Weight: 9.95 kDa
Atom Count: 677
Modeled Residue Count: 73
Deposited Residue Count: 84
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
hypothetical protein SPy1572	A	84	Streptococcus pyogenes M1 GAS	Mutation(s): 0 Gene Names: gi:13622656
UniProt
Find proteins for Q99YR7 (Streptococcus pyogenes serotype M1) Explore Q99YR7 Go to UniProtKB: Q99YR7
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q99YR7
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free: 0.256 (Depositor), 0.264 (DCC)
R-Value Work: 0.220 (Depositor), 0.227 (DCC)
R-Value Observed: 0.220 (Depositor)

Space Group: P 3 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 67.583	α = 90
b = 67.583	β = 90
c = 28.592	γ = 120

Software Package:

Software Name	Purpose
CNS	refinement
SBC-Collect	data collection
HKL-2000	data scaling
CNS	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2005-04-19

Deposition Author(s):

Midwest Center for Structural Genomics (MCSG)

Revision History (Full details and data files)

Version 1.0: 2005-04-19
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Derived calculations, Source and taxonomy, Version format compliance
Version 1.3: 2024-02-14
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.