1YWI

Structure of the FBP11WW1 domain complexed to the peptide APPTPPPLPP

Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history. 

Literature

Structural basis for APPTPPPLPP peptide recognition by the FBP11WW1 domain.

Pires, J.R., Parthier, C., Aido-Machado, R., Wiedemann, U., Otte, L., Bohm, G., Rudolph, R., Oschkinat, H.

(2005) J.Mol.Biol. 348: 399-408

  • DOI: 10.1016/j.jmb.2005.02.056
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 

    • WW domains are small protein-protein interaction modules that recognize proline-rich stretches in proteins. The class II tandem WW domains of the formin binding protein 11 (FBP11) recognize specifically proteins containing PPLPp motifs as present in ...

    WW domains are small protein-protein interaction modules that recognize proline-rich stretches in proteins. The class II tandem WW domains of the formin binding protein 11 (FBP11) recognize specifically proteins containing PPLPp motifs as present in the formins that are involved in limb and kidney development, and in the methyl-CpG-binding protein 2 (MeCP2), associated with the Rett syndrome. The interaction involves the specific recognition of a leucine side-chain. Here, we report on the novel structure of the complex formed by the FPB11WW1 domain and the formin fragment APPTPPPLPP revealing the specificity determinants of class II WW domains.

    Organizational Affiliation: 

    Departamento de Bioquímica Médica, Instituto de Ciências Biomédicas, Universidade Federal do Rio de Janeiro, Av. Brigadeiro Trompowiski s/n CCS, Rio de Janeiro, RJ 21941-590, Brazil. jrmpires@gmx.net




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Formin-binding protein 3
A
41Homo sapiensMutation(s): 0 
Gene Names: PRPF40A (FBP11, FLAF1, FNBP3, HIP10, HYPA)
Find proteins for O75400 (Homo sapiens)
Go to Gene View: PRPF40A
Go to UniProtKB:  O75400
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Formin
B
10N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with the lowest energy 
  • Olderado: 1YWI Olderado

Structure Validation

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Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2005-04-12
    Type: Initial release
  • Version 1.1: 2008-04-30
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance