Crystal structure of human PIM1 kinase domain
Knapp, S., Debreczeni, J., Bullock, A., von Delft, F., Sundstrom, M., Arrowsmith, C., Edwards, A., Guo, K.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Proto-oncogene serine/threonine-protein kinase Pim-1 | 313 | Homo sapiens | Mutation(s): 0  Gene Names: PIM1 EC: 2.7.1.37 (PDB Primary Data), 2.7.11.1 (UniProt) | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P11309 (Homo sapiens) Explore P11309  Go to UniProtKB:  P11309 | |||||
PHAROS:  P11309 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P11309 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
BI1 Query on BI1 | C [auth A] | 3-{1-[3-(DIMETHYLAMINO)PROPYL]-1H-INDOL-3-YL}-4-(1H-INDOL-3-YL)-1H-PYRROLE-2,5-DIONE C25 H24 N4 O2 QMGUOJYZJKLOLH-UHFFFAOYSA-N | |||
SO4 Query on SO4 | B [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Binding Affinity Annotations  | |||
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ID | Source | Binding Affinity | |
BI1 | PDBBind:  1XWS | Kd: 10 (nM) from 1 assay(s) | |
BindingDB:  1XWS | Kd: 10 (nM) from 1 assay(s) | ||
IC50: min: 27, max: 150 (nM) from 2 assay(s) | |||
-TΔS: 16.08 (kJ/mol) from 1 assay(s) | |||
ΔG: -4.35e+1 (kJ/mol) from 1 assay(s) |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 99.55 | α = 90 |
b = 99.55 | β = 90 |
c = 80.06 | γ = 120 |
Software Name | Purpose |
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REFMAC | refinement |
CrystalClear | data reduction |
CrystalClear | data scaling |
PHASER | phasing |