1XBU

Streptomyces griseus aminopeptidase complexed with p-iodo-D-phenylalanine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.167 
  • R-Value Work: 0.127 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Streptomyces griseus aminopeptidase complexed with p-iodo-D-phenylalanine

Reiland, V.Gilboa, R.Spungin-Bialik, A.Schomburg, D.Shoham, Y.Blumberg, S.Shoham, G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Aminopeptidase
A
284Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)Mutation(s): 0 
EC: 3.4.11.24
Find proteins for P80561 (Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350))
Go to UniProtKB:  P80561
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
CA
Query on CA

Download SDF File 
Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
IOY
Query on IOY

Download SDF File 
Download CCD File 
A
P-IODO-D-PHENYLALANINE
4-IODOPHENYLALANINE
C9 H10 I N O2
PZNQZSRPDOEBMS-MRVPVSSYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.167 
  • R-Value Work: 0.127 
  • Space Group: P 41 21 2
Unit Cell:
Length (Å)Angle (°)
a = 60.970α = 90.00
b = 60.970β = 90.00
c = 144.519γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
SHELXphasing
SHELXmodel building
SCALEPACKdata scaling
SHELXL-97refinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2005-10-04
    Type: Initial release
  • Version 1.1: 2008-04-30
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance