1X5L | pdb_00001x5l

Solution structure of the second fn3 domain of Eph receptor A8 protein

PDB DOI: https://doi.org/10.2210/pdb1X5L/pdb
BMRB: 11208

Classification: SIGNALING PROTEIN
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2005-05-16 Released: 2005-11-16
Deposition Author(s): Qin, X.R., Nagashima, T., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function, structures with the lowest energy, structures with the least restraint violations

wwPDB Validation 3D Report Full Report

Validation slider image for 1X5L

This is version 1.4 of the entry. See complete history.

Literature

Solution structure of the second fn3 domain of Eph receptor A8 protein

Qin, X.R., Nagashima, T., Hayashi, F., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 11.96 kDa
Atom Count: 838
Modeled Residue Count: 111
Deposited Residue Count: 111
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Ephrin type-A receptor 8	A	111	Homo sapiens	Mutation(s): 0 Gene Names: KAZUSA cDNA fh16961 EC: 2.7.1.112 (PDB Primary Data), 2.7.10.1 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for P29322 (Homo sapiens) Explore P29322 Go to UniProtKB: P29322
PHAROS: P29322 GTEx: ENSG00000070886
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P29322
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function, structures with the lowest energy, structures with the least restraint violations

Structure Validation

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Entry History

Deposition Data

Released Date: 2005-11-16

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2005-11-16
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-02
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.