1WQ6

The tetramer structure of the nervy homolgy two (NHR2) domain of AML1-ETO is critical for AML1-ETO'S activity


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.213 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The tetramer structure of the Nervy homology two domain, NHR2, is critical for AML1/ETO's activity

Liu, Y.Cheney, M.D.Gaudet, J.J.Chruszcz, M.Lukasik, S.M.Sugiyama, D.Lary, J.Cole, J.Dauter, Z.Minor, W.Speck, N.A.Bushweller, J.H.

(2006) Cancer Cell 9: 249-260

  • DOI: 10.1016/j.ccr.2006.03.012

  • PubMed Abstract: 
  • AML1/ETO is the chimeric protein resulting from the t(8;21) in acute myeloid leukemia. The Nervy homology 2 (NHR2) domain in ETO mediates oligomerization and AML1/ETO's interactions with ETO, MTGR1, and MTG16, and with the corepressor molecules mSin3 ...

    AML1/ETO is the chimeric protein resulting from the t(8;21) in acute myeloid leukemia. The Nervy homology 2 (NHR2) domain in ETO mediates oligomerization and AML1/ETO's interactions with ETO, MTGR1, and MTG16, and with the corepressor molecules mSin3A and HDAC1 and HDAC3. We solved the NHR2 domain structure and found it to be an alpha-helical tetramer. We show that oligomerization contributes to AML1/ETO's inhibition of granulocyte differentiation, is essential for its ability to enhance the clonogenic potential of primary mouse bone marrow cells, and affects AML1/ETO's activity on several endogenous genes. Oligomerization is also required for AML1/ETO's interactions with ETO, MTGR1, and MTG16, but not with other corepressor molecules.


    Organizational Affiliation

    Department of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, Virginia 22908, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
AML1-ETO
A, B
72Homo sapiensMutation(s): 0 
Gene Names: RUNX1T1 (AML1T1, CBFA2T1, CDR, ETO, MTG8, ZMYND2)
Find proteins for Q06455 (Homo sapiens)
Go to Gene View: RUNX1T1
Go to UniProtKB:  Q06455
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 60.720α = 90.00
b = 75.442β = 90.00
c = 30.781γ = 90.00
Software Package:
Software NamePurpose
SHELXDphasing
SOLVEphasing
HKL-2000data scaling
HKL-2000data reduction
RESOLVEmodel building
RESOLVEphasing
HKL-2000data collection
REFMACrefinement
SHARPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2005-10-04
    Type: Initial release
  • Version 1.1: 2008-04-30
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Derived calculations, Version format compliance