Biological Assembly 1  

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Global Symmetry: Cyclic - C2  (3D View)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 42453.55 
• Atom Count: 2899 
• Residue Count: 378 
• Unique protein chains: 1

1VPK

Crystal structure of DNA polymerase III, beta subunit (TM0262) from Thermotoga maritima at 2.00 A resolution

• DOI: 10.2210/pdb1VPK/pdb

• Classification: TRANSFERASE
• Organism(s): Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
• Expression System: Escherichia coli


• Deposited: 2004-11-09 Released: 2004-11-23 
• Deposition Author(s): Joint Center for Structural Genomics (JCSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2 Å
• R-Value Free: 0.232 
• R-Value Work: 0.196 

Literature

Crystal structure of DNA polymerase III, beta subunit (TM0262) from Thermotoga maritima at 2.00 A resolution

Joint Center for Structural Genomics (JCSG)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
DNA polymerase III, beta subunit	A	378	Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)	Mutation(s): 0
Find proteins for Q9WYA0 (Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)) Go to UniProtKB:  Q9WYA0

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2 Å
• R-Value Free: 0.232 
• R-Value Work: 0.196 
• Space Group: P 4₂ 2₁ 2
• Diffraction Data DOI: 
  10.18430/M31VPK Protein Diffraction

Unit Cell:

Length (Å)	Angle (°)
a = 91.702	α = 90.00
b = 91.702	β = 90.00
c = 111.463	γ = 90.00

Software Package:

Software Name	Purpose
DENZO	data reduction
MOLREP	phasing
SCALEPACK	data scaling
REFMAC	refinement

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2004-11-09 
• Released Date: 2004-11-23 
• Deposition Author(s): Joint Center for Structural Genomics (JCSG)

Revision History 

• Version 1.0: 2004-11-23
  Type: Initial release
• Version 1.1: 2008-04-26
  Type: Version format compliance
• Version 1.2: 2011-07-13
  Type: Advisory, Source and taxonomy, Version format compliance