Macromolecule Content

• Total Structure Weight: 6703.05 
• Atom Count: 447 
• Residue Count: 21 
• Unique nucleic acid chains: 1

1SZY

Solution structure of ITALY1 ("Initiator tRNA Anticodon Loop from Yeast"), an unmodified 21-nt RNA with the sequence of the anticodon stem-loop of yeast initiator tRNA

• DOI: 10.2210/pdb1SZY/pdb
• NDB: 1SZY

• Classification: RNA


• Deposited: 2004-04-06 Released: 2004-04-20 
• Deposition Author(s): Schweisguth, D.C., Moore, P.B.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Submitted: 1 

Literature

On the conformation of the anticodon loops of initiator and elongator methionine tRNAs.

Schweisguth, D.C., Moore, P.B.

(1997) J.Mol.Biol. 267: 505-519

• PubMed: 9126834 
• DOI: 10.1006/jmbi.1996.0903


• PubMed Abstract: 
  

The solution conformations of analogues of initiator and elongator tRNA anticodon stem-loops have been compared by NMR. The data indicate that both have conformations closely similar to those reported for crystalline elongator tRNAs. The two loops differ in their dynamics, however: that of the elongator analogue is more flexible than its initiator counterpart. The anticodon stem-loops of initiator tRNAs are more likely to be distinguished from those of elongator tRNAs during initiation on the basis of their distinctive stem sequences, than they are by differences in the conformations of their anticodon loops.

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Organizational Affiliation: 

Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Length	Organism
5'-R(P*GP*GP*CP*AP*GP*GP*GP*CP*UP*CP*AP*UP*AP*AP*CP*CP*CP*UP*GP*CP*C)-3'	A	21	N/A

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Submitted: 1 

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2004-04-06 
• Released Date: 2004-04-20 
• Deposition Author(s): Schweisguth, D.C., Moore, P.B.

Revision History 

• Version 1.0: 2004-04-20
  Type: Initial release
• Version 1.1: 2008-04-30
  Type: Version format compliance
• Version 1.2: 2011-07-13
  Type: Version format compliance