1SVB

ENVELOPE GLYCOPROTEIN FROM TICK-BORNE ENCEPHALITIS VIRUS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.183 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The envelope glycoprotein from tick-borne encephalitis virus at 2 A resolution.

Rey, F.A.Heinz, F.X.Mandl, C.Kunz, C.Harrison, S.C.

(1995) Nature 375: 291-298

  • DOI: 10.1038/375291a0
  • Also Cited By: 1OKE, 1OAN

  • PubMed Abstract: 
  • The crystallographically determined structure of a soluble fragment from the major envelope protein of a flavivirus reveals an unusual architecture. The flat, elongated dimer extends in a direction that would be parallel to the viral membrane. Residu ...

    The crystallographically determined structure of a soluble fragment from the major envelope protein of a flavivirus reveals an unusual architecture. The flat, elongated dimer extends in a direction that would be parallel to the viral membrane. Residues that influence binding of monoclonal antibodies lie on the outward-facing surface of the protein. The clustering of mutations that affect virulence in various flaviviruses indicates a possible receptor binding site and, together with other mutational and biochemical data, suggests a picture for the fusion-activating, conformational change triggered by low pH.


    Organizational Affiliation

    Department of Molecular and Cellular Biology, Harvard University, Cambridge, Massachusetts 02138, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
TICK-BORNE ENCEPHALITIS VIRUS GLYCOPROTEIN
A
395Tick-borne encephalitis virus European subtype (strain Neudoerfl)Mutation(s): 0 
Find proteins for P14336 (Tick-borne encephalitis virus European subtype (strain Neudoerfl))
Go to UniProtKB:  P14336
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAG
Query on NAG

Download SDF File 
Download CCD File 
A
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.183 
  • Space Group: P 61 2 2
Unit Cell:
Length (Å)Angle (°)
a = 144.000α = 90.00
b = 144.000β = 90.00
c = 119.000γ = 120.00
Software Package:
Software NamePurpose
X-PLORrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1996-06-10
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Non-polymer description, Version format compliance