1SVA

SIMIAN VIRUS 40


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.268 
  • R-Value Work: 0.257 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The structure of simian virus 40 refined at 3.1 A resolution.

Stehle, T.Gamblin, S.J.Yan, Y.Harrison, S.C.

(1996) Structure 4: 165-182


  • PubMed Abstract: 
  • The structure of simian virus 40 (SV40), previously determined at 3.8 degree resolution, shows how its pentameric VP1 assembly units are tied together by extended C-terminal arms. In order to define more precisely the possible assembly mechanisms, we ...

    The structure of simian virus 40 (SV40), previously determined at 3.8 degree resolution, shows how its pentameric VP1 assembly units are tied together by extended C-terminal arms. In order to define more precisely the possible assembly mechanisms, we have refined the structure at 3.1 degree resolution.


    Related Citations: 
    • Structure of Simian Virus 40 at 3.8-A Resolution
      Liddington, R.C.,Yan, Y.,Moulai, J.,Sahli, R.,Benjamin, T.L.,Harrison, S.C.
      (1991) Nature 354: 278


    Organizational Affiliation

    Howard Hughes Medical Institute and Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
SIMIAN VIRUS 40
1, 2, 3, 4, 5, 6
361Simian virus 40Mutation(s): 0 
Find proteins for P03087 (Simian virus 40)
Go to UniProtKB:  P03087
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.268 
  • R-Value Work: 0.257 
  • Space Group: I 2 3
Unit Cell:
Length (Å)Angle (°)
a = 558.000α = 90.00
b = 558.000β = 90.00
c = 558.000γ = 90.00
Software Package:
Software NamePurpose
X-PLORmodel building
X-PLORphasing
X-PLORrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1996-06-10
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance