1RIS

CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN S6 FROM THERMUS THERMOPHILUS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Work: 0.183 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal structure of the ribosomal protein S6 from Thermus thermophilus.

Lindahl, M.Svensson, L.A.Liljas, A.Sedelnikova, S.E.Eliseikina, I.A.Fomenkova, N.P.Nevskaya, N.Nikonov, S.V.Garber, M.B.Muranova, T.A.Rykonova, A.I.Amons, R.

(1994) EMBO J. 13: 1249-1254

  • Also Cited By: 2BXJ, 1QJH

  • PubMed Abstract: 
  • The amino acid sequence and crystal structure of the ribosomal protein S6 from the small ribosomal subunit of Thermus thermophilus have been determined. S6 is a small protein with 101 amino acid residues. The 3D structure, which was determined to 2.0 ...

    The amino acid sequence and crystal structure of the ribosomal protein S6 from the small ribosomal subunit of Thermus thermophilus have been determined. S6 is a small protein with 101 amino acid residues. The 3D structure, which was determined to 2.0 A resolution, consists of a four-stranded anti-parallel beta-sheet with two alpha-helices packed on one side. Similar folding patterns have been observed for other ribosomal proteins and may suggest an original RNA-interacting motif. Related topologies are also found in several other nucleic acid-interacting proteins and based on the assumption that the structure of the ribosome was established early in the molecular evolution, the possibility that an ancestral RNA-interacting motif in ribosomal proteins is the evolutionary origin for the nucleic acid-interacting domain in large classes of ribonucleic acid binding proteins should be considered.


    Related Citations: 
    • Crystals of Protein S6 from the 30 S Ribosomal Subunit of Thermus Thermophilus
      Sedelnikova, S.E.,Agalarov, S.Ch.,Eliseikina, I.A.,Fomenkova, N.P.,Nikonov, S.V.,Garber, M.B.,Svensson, L.A.,Liljas, A.
      (1991) J.Mol.Biol. 220: 549


    Organizational Affiliation

    Chemical Center, University of Lund, Sweden.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
RIBOSOMAL PROTEIN S6
A
101Thermus thermophilusGene Names: rpsF (rps6)
Find proteins for P23370 (Thermus thermophilus)
Go to UniProtKB:  P23370
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Work: 0.183 
  • Space Group: C 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 106.810α = 90.00
b = 52.720β = 90.00
c = 41.120γ = 90.00
Software Package:
Software NamePurpose
X-PLORrefinement
X-PLORphasing
X-PLORmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1994-09-30
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2017-11-29
    Type: Derived calculations, Other