1QYA

CRYSTAL STRUCTURE OF E. COLI PROTEIN YDDE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.228 
  • R-Value Work: 0.186 
  • R-Value Observed: 0.188 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal structure of E. coli yddE protein reveals a striking homology with diaminopimelate epimerase

Grassick, A.Sulzenbacher, G.Roig-Zamboni, V.Campanacci, V.Cambillau, C.Bourne, Y.

(2004) Proteins 55: 764-767


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
HYPOTHETICAL PROTEIN yddEAB307Escherichia coliMutation(s): 0 
Gene Names: yddE
EC: 5.1
Find proteins for P37757 (Escherichia coli (strain K12))
Explore P37757 
Go to UniProtKB:  P37757
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.228 
  • R-Value Work: 0.186 
  • R-Value Observed: 0.188 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 67.159α = 90
b = 79.631β = 115.26
c = 77.022γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALAdata scaling
MOLREPphasing
REFMACrefinement
CCP4data scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2004-06-08
    Type: Initial release
  • Version 1.1: 2008-04-29
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Advisory, Version format compliance