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Download EndnoteThe Crystal Structure of a Putative Formate Dehydrogenase from Pyrobaculum Aerophilum
Peat, T.S., Newman, J., Waldo, G.S., Terwilliger, T.C.To be published.
1QP8
CRYSTAL STRUCTURE OF A PUTATIVE FORMATE DEHYDROGENASE FROM PYROBACULUM AEROPHILUM
- DOI: 10.2210/pdb1QP8/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
- Expression System: Escherichia coli
- Deposited: 1999-06-01 Released: 1999-06-11
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.8 Å
- R-Value Free: 0.320
- R-Value Work: 0.274
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| FORMATE DEHYDROGENASE | A, B | 303 | Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) | Mutation(s): 0 |
Find proteins for Q8ZXP5 (Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)) Go to UniProtKB: Q8ZXP5 | ||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NDP Query on NDP | A | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H30 N7 O17 P3 ACFIXJIJDZMPPO-NNYOXOHSSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.8 Å
- R-Value Free: 0.320
- R-Value Work: 0.274
- Space Group: P 41 21 2
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 101.760 | α = 90.00 |
| b = 101.760 | β = 90.00 |
| c = 212.950 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SHARP | phasing |
| CNS | refinement |
| CCP4 | data scaling |
Entry History
Deposition Data
- Deposited Date: 1999-06-01
- Released Date: 1999-06-11
- Deposition Author(s): Peat, T.S., Newman, J., Waldo, G.S., Terwilliger, T.C.
