1QNZ

NMR structure of the 0.5b anti-HIV antibody complex with the gp120 V3 peptide


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Submitted: 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

NMR Structure of an Anti-Gp120 Antibody Complex with a V3 Peptide Reveals a Surface Important for Co-Receptor Binding

Tugarinov, V.Zvi, A.Levy, R.Hayek, Y.Matsushita, S.Anglister, J.

(2000) Structure 8: 385-395


  • PubMed Abstract: 
  • The protein 0.5beta is a potent strain-specific human immunodeficiency virus type 1 (HIV-1) neutralizing antibody raised against the entire envelope glycoprotein (gp120) of the HIV-1(IIIB) strain. The epitope recognized by 0.5beta is located within t ...

    The protein 0.5beta is a potent strain-specific human immunodeficiency virus type 1 (HIV-1) neutralizing antibody raised against the entire envelope glycoprotein (gp120) of the HIV-1(IIIB) strain. The epitope recognized by 0.5beta is located within the third hypervariable region (V3) of gp120. Recently, several HIV-1 V3 residues involved in co-receptor utilization and selection were identified.


    Organizational Affiliation

    Department of Structural Biology, The Weizmann Institute of Science, Rehovot, 76100, Israel.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
0.5B ANTIBODY (HEAVY CHAIN)
H
119Mus musculus
Find proteins for P01750 (Mus musculus)
Go to UniProtKB:  P01750
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
0.5B ANTIBODY (LIGHT CHAIN)
L
112Mus musculus
Find proteins for P01665 (Mus musculus)
Go to UniProtKB:  P01665
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
GP120
P
18Human immunodeficiency virus 1Gene Names: env
Find proteins for Q79416 (Human immunodeficiency virus 1)
Go to UniProtKB:  Q79416
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Submitted: 

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2000-06-03
    Type: Initial release
  • Version 1.1: 2013-08-07
    Type: Database references, Derived calculations, Other, Source and taxonomy, Structure summary, Version format compliance
  • Version 1.2: 2018-01-17
    Type: Database references