1P0L | pdb_00001p0l

HP (2-20) Substitution GLN To TRP Modification In SDS-D25 MICELLES

PDB DOI: https://doi.org/10.2210/pdb1P0L/pdb

Classification: RIBOSOME
Organism(s): Helicobacter pylori (strain ATCC 700392 / 26695)
Mutation(s): Yes

Deposited: 2003-04-10 Released: 2003-05-20
Deposition Author(s): Lee, K.H., Lee, D.G., Park, Y.K., Harm, K.S., Kim, Y.M.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 1P0L

This is version 1.4 of the entry. See complete history.

Literature

Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy

Lee, K.H., Lee, D.G., Park, Y.K., Harm, K.S., Kim, Y.M.

To be published.

Macromolecule Content

Total Structure Weight: 2.38 kDa
Atom Count: 169
Modeled Residue Count: 20
Deposited Residue Count: 20
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
19-mer peptide from 50S ribosomal protein L1	A	20	N/A	Mutation(s): 1
UniProt
Find proteins for P56029 (Helicobacter pylori (strain ATCC 700392 / 26695)) Explore P56029 Go to UniProtKB: P56029
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P56029
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2003-05-20

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2003-05-20
Type: Initial release
Version 1.1: 2008-04-29
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2021-11-10
Changes: Data collection, Database references, Derived calculations, Experimental preparation
Version 1.4: 2024-10-23
Changes: Data collection, Structure summary

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.