1O9A

Solution structure of the complex of 1F12F1 from fibronectin with B3 from FnBB from S. dysgalactiae


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 15 
  • Selection Criteria: LEAST RESTRAINT VIOLATION 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Pathogenic bacteria attach to human fibronectin through a tandem beta-zipper.

Schwarz-Linek, U.Werner, J.M.Pickford, A.R.Gurusiddappa, S.Kim, J.H.Pilka, E.S.Briggs, J.A.Gough, T.S.Hook, M.Campbell, I.D.Potts, J.R.

(2003) Nature 423: 177-181

  • DOI: 10.1038/nature01589

  • PubMed Abstract: 
  • Staphylococcus aureus and Streptococcus pyogenes, two important human pathogens, target host fibronectin (Fn) in their adhesion to and invasion of host cells. Fibronectin-binding proteins (FnBPs), anchored in the bacterial cell wall, have multiple Fn ...

    Staphylococcus aureus and Streptococcus pyogenes, two important human pathogens, target host fibronectin (Fn) in their adhesion to and invasion of host cells. Fibronectin-binding proteins (FnBPs), anchored in the bacterial cell wall, have multiple Fn-binding repeats in an unfolded region of the protein. The bacterium-binding site in the amino-terminal domain (1-5F1) of Fn contains five sequential Fn type 1 (F1) modules. Here we show the structure of a streptococcal (S. dysgalactiae) FnBP peptide (B3) in complex with the module pair 1F12F1. This identifies 1F1- and 2F1-binding motifs in B3 that form additional antiparallel beta-strands on sequential F1 modules-the first example of a tandem beta-zipper. Sequence analyses of larger regions of FnBPs from S. pyogenes and S. aureus reveal a repeating pattern of F1-binding motifs that match the pattern of F1 modules in 1-5F1 of Fn. In the process of Fn-mediated invasion of host cells, therefore, the bacterial proteins seem to exploit the modular structure of Fn by forming extended tandem beta-zippers. This work is a vital step forward in explaining the full mechanism of the integrin-dependent FnBP-mediated invasion of host cells.


    Organizational Affiliation

    Department of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, UK.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
FIBRONECTIN
A
93Homo sapiensGene Names: FN1 (FN)
Find proteins for P02751 (Homo sapiens)
Go to Gene View: FN1
Go to UniProtKB:  P02751
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
FIBRONECTIN BINDING PROTEIN
B
36Streptococcus dysgalactiaeGene Names: fnbB
Find proteins for Q53971 (Streptococcus dysgalactiae)
Go to UniProtKB:  Q53971
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 15 
  • Selection Criteria: LEAST RESTRAINT VIOLATION 
  • Olderado: 1O9A Olderado

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2003-05-08
    Type: Initial release
  • Version 1.1: 2015-04-15
    Type: Database references, Derived calculations, Version format compliance
  • Version 1.2: 2018-01-24
    Type: Data collection, Database references