1NCS

NMR STUDY OF SWI5 ZINC FINGER DOMAIN 1


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Submitted: 46 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

The solution structure of the first zinc finger domain of SWI5: a novel structural extension to a common fold.

Dutnall, R.N.Neuhaus, D.Rhodes, D.

(1996) Structure 4: 599-611

  • DOI: 10.1016/s0969-2126(96)00064-0
  • Primary Citation of Related Structures:  
    1NCS

  • PubMed Abstract: 
  • The 2Cys-2His (C2-H2) zinc finger is a protein domain commonly used for sequence-specific DNA recognition. The zinc fingers of the yeast transcription factors SWI5 and ACE2 share strong sequence homology, which extends into a region N-terminal to the first finger, suggesting that the DNA-binding domains of these two proteins include additional structural elements ...

    The 2Cys-2His (C2-H2) zinc finger is a protein domain commonly used for sequence-specific DNA recognition. The zinc fingers of the yeast transcription factors SWI5 and ACE2 share strong sequence homology, which extends into a region N-terminal to the first finger, suggesting that the DNA-binding domains of these two proteins include additional structural elements.


    Related Citations: 
    • Adjacent Zinc-Finger Motifs in Multiple Zinc-Finger Peptides from Swi5 Form Structurally Independent, Flexibly Linked Domains
      Nakaseko, Y., Neuhaus, D., Klug, A., Rhodes, D.
      (1992) J Mol Biol 228: 619
    • Solution Structures of Two Zinc-Finger Domains from Swi5 Obtained Using Two-Dimensional 1H Nuclear Magnetic Resonance Spectroscopy. A Zinc-Finger Structure with a Third Strand of Beta-Sheet
      Neuhaus, D., Nakaseko, Y., Schwabe, J.W., Klug, A.
      (1992) J Mol Biol 228: 637

    Organizational Affiliation

    MRC Laboratory of Molecular Biology, Cambridge, UK.



Macromolecules
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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
TRANSCRIPTIONAL FACTOR SWI5A47Saccharomyces cerevisiaeMutation(s): 0 
Gene Names: T7
UniProt
Find proteins for P08153 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore P08153 
Go to UniProtKB:  P08153
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP08153
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download Ideal Coordinates CCD File 
B [auth A]ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Submitted: 46 
  • OLDERADO: 1NCS Olderado

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1996-06-10
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2022-02-23
    Changes: Database references, Derived calculations, Other