1MVP

STRUCTURAL STUDIES OF THE RETROVIRAL PROTEINASE FROM AVIAN MYELOBLASTOSIS ASSOCIATED VIRUS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Structural studies of the retroviral proteinase from avian myeloblastosis associated virus.

Ohlendorf, D.H.Foundling, S.I.Wendoloski, J.J.Sedlacek, J.Strop, P.Salemme, F.R.

(1992) Proteins 14: 382-391

  • DOI: 10.1002/prot.340140307
  • Primary Citation of Related Structures:  2MVP

  • PubMed Abstract: 
  • The structure of the retroviral proteinase from avian myeloblastosis associated virus (MAV) has been determined and refined at 2.2 A resolution. This structure is compared with those of homologous proteinases from Rous sarcoma virus (RSV) and human i ...

    The structure of the retroviral proteinase from avian myeloblastosis associated virus (MAV) has been determined and refined at 2.2 A resolution. This structure is compared with those of homologous proteinases from Rous sarcoma virus (RSV) and human immunodeficiency type 1 virus (HIV). Through comparison with the structure of a proteinase-inhibitor complex from HIV, a model of a complex between MAV proteinase and a peptide substrate has been generated. Examination of this model suggests structural basis for the diverse specifications of viral proteinases.


    Organizational Affiliation

    Du Pont Merck Pharmaceutical Company, Wilmington, Delaware 19880-0228.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
MYELOBLASTOSIS ASSOCIATED VIRAL PROTEASE
A, B
124Avian myeloblastosis associated virusGene Names: gag
EC: 3.4.23.-
Find proteins for P26315 (Avian myeloblastosis associated virus)
Go to UniProtKB:  P26315
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 88.920α = 90.00
b = 88.920β = 90.00
c = 78.790γ = 120.00
Software Package:
Software NamePurpose
PROLSQrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1992-01-15
    Type: Initial release
  • Version 1.1: 2008-03-03
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2017-11-29
    Type: Derived calculations, Other