1MVP

STRUCTURAL STUDIES OF THE RETROVIRAL PROTEINASE FROM AVIAN MYELOBLASTOSIS ASSOCIATED VIRUS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Observed: 0.172 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Structural studies of the retroviral proteinase from avian myeloblastosis associated virus.

Ohlendorf, D.H.Foundling, S.I.Wendoloski, J.J.Sedlacek, J.Strop, P.Salemme, F.R.

(1992) Proteins 14: 382-391

  • DOI: 10.1002/prot.340140307
  • Primary Citation of Related Structures:  
    1MVP

  • PubMed Abstract: 
  • The structure of the retroviral proteinase from avian myeloblastosis associated virus (MAV) has been determined and refined at 2.2 A resolution. This structure is compared with those of homologous proteinases from Rous sarcoma virus (RSV) and human immunodeficiency type 1 virus (HIV) ...

    The structure of the retroviral proteinase from avian myeloblastosis associated virus (MAV) has been determined and refined at 2.2 A resolution. This structure is compared with those of homologous proteinases from Rous sarcoma virus (RSV) and human immunodeficiency type 1 virus (HIV). Through comparison with the structure of a proteinase-inhibitor complex from HIV, a model of a complex between MAV proteinase and a peptide substrate has been generated. Examination of this model suggests structural basis for the diverse specifications of viral proteinases.


    Organizational Affiliation

    Du Pont Merck Pharmaceutical Company, Wilmington, Delaware 19880-0228.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
MYELOBLASTOSIS ASSOCIATED VIRAL PROTEASEAB124Avian myeloblastosis-associated virusMutation(s): 0 
Gene Names: gag
EC: 3.4.23
Find proteins for P26315 (Avian myeloblastosis associated virus)
Explore P26315 
Go to UniProtKB:  P26315
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Observed: 0.172 
  • Space Group: P 31 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 88.92α = 90
b = 88.92β = 90
c = 78.79γ = 120
Software Package:
Software NamePurpose
PROLSQrefinement

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1992-01-15
    Type: Initial release
  • Version 1.1: 2008-03-03
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2017-11-29
    Changes: Derived calculations, Other