1M3I

Perfringolysin O, new crystal form


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.280 
  • R-Value Work: 0.233 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structural Snapshots in the Molecular Mechanism of PFO Revealed

Rossjohn, J.Parker, M.Polekhina, G.Feil, S.Tweten, R.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
perfringolysin O
A, B, C, D
471Clostridium perfringens (strain 13 / Type A)Mutation(s): 0 
Gene Names: pfo (pfoA, pfoR)
Membrane protein
mpstruct
Group: 
TRANSMEMBRANE PROTEINS: BETA-BARREL
Sub Group: 
Adventitious Membrane Proteins: Beta-sheet Pore-forming Toxins/Attack Complexes
Protein: 
Perfringolysin O (PFO) protomer
Find proteins for P0C2E9 (Clostridium perfringens (strain 13 / Type A))
Go to UniProtKB:  P0C2E9
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.280 
  • R-Value Work: 0.233 
  • Space Group: P 31
Unit Cell:
Length (Å)Angle (°)
a = 130.410α = 90.00
b = 130.410β = 90.00
c = 129.900γ = 120.00
Software Package:
Software NamePurpose
DENZOdata reduction
AMoREphasing
SCALEPACKdata scaling
CNSrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2004-02-03
    Type: Initial release
  • Version 1.1: 2008-04-28
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance