1LKY

Structure of the wild-type TEL-SAM polymer


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.283 
  • R-Value Work: 0.232 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Native interface of the SAM domain polymer of TEL.

Tran, H.H.Kim, C.A.

(2002) BMC STRUCT.BIOL. 2: 5-5


  • PubMed Abstract: 
  • TEL is a transcriptional repressor containing a SAM domain that forms a helical polymer. In a number of hematologic malignancies, chromosomal translocations lead to aberrant fusions of TEL-SAM to a variety of other proteins, including many tyrosine k ...

    TEL is a transcriptional repressor containing a SAM domain that forms a helical polymer. In a number of hematologic malignancies, chromosomal translocations lead to aberrant fusions of TEL-SAM to a variety of other proteins, including many tyrosine kinases. TEL-SAM polymerization results in constitutive activation of the tyrosine kinase domains to which it becomes fused, leading to cell transformation. Thus, inhibitors of TEL-SAM self-association could abrogate transformation in these cells. In previous work, we determined the structure of a mutant TEL-SAM polymer bearing a Val to Glu substitution in center of the subunit interface. It remained unclear how much the mutation affected the architecture of the polymer, however.


    Organizational Affiliation

    Department of Chemistry and Biochemistry, UCLA Laboratory of Structural Biology and Molecular Medicine, Molecular Biology Institute, 90095-1570, USA. htran@mbi.ucla.edu




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
TRANSCRIPTION FACTOR ETV6
A, C, E
77Homo sapiensGene Names: ETV6 (TEL, TEL1)
Find proteins for P41212 (Homo sapiens)
Go to Gene View: ETV6
Go to UniProtKB:  P41212
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
TRANSCRIPTION FACTOR ETV6
B, D, F
77Homo sapiensGene Names: ETV6 (TEL, TEL1)
Find proteins for P41212 (Homo sapiens)
Go to Gene View: ETV6
Go to UniProtKB:  P41212
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B, C, E, F
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.283 
  • R-Value Work: 0.232 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 52.752α = 116.21
b = 60.291β = 98.89
c = 62.318γ = 98.65
Software Package:
Software NamePurpose
AMoREphasing
DENZOdata reduction
SCALEPACKdata scaling
CNSrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2002-06-12
    Type: Initial release
  • Version 1.1: 2008-04-28
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance