1LBU | pdb_00001lbu

HYDROLASE METALLO (ZN) DD-PEPTIDASE

• PDB DOI: https://doi.org/10.2210/pdb1LBU/pdb

• Classification: HYDROLASE
• Organism(s): Streptomyces albus G
• Mutation(s): No 


• Deposited: 1996-03-16 Released: 1996-11-08 
• Deposition Author(s): Charlier, P., Wery, J.-P., Dideberg, O., Frere, J.-M.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Work: 
  0.164 (Depositor) 

Literature

Streptomyces Albus G D-Ala-A-Ala Carboxypeptidase

Charlier, P., Wery, J.-P., Dideberg, O., Frere, J.-M.

(2004) Handbook Of Metalloproteins 3: 164

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 22.25 kDa 
• Atom Count: 1,793 
• Modeled Residue Count: 213 
• Deposited Residue Count: 213 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
MURAMOYL-PENTAPEPTIDE CARBOXYPEPTIDASE	A	213	Streptomyces albus G	Mutation(s): 0  EC: 3.4.17.8 (PDB Primary Data), 3.4.17.14 (UniProt)
UniProt
Find proteins for P00733 (Streptomyces albus G) Explore P00733  Go to UniProtKB:  P00733

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Work:  0.164 (Depositor) 

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 51.08	α = 90
b = 49.7	β = 100.6
c = 38.65	γ = 90

Software Package:

Software Name	Purpose
PROLSQ	refinement

Structure Validation

Entry History 

Deposition Data

• Released Date: 1996-11-08 
Deposition Author(s): Charlier, P., Wery, J.-P., Dideberg, O., Frere, J.-M.

Revision History  

• Version 1.0: 1996-11-08
  Type: Initial release
  
• Version 1.1: 2008-03-24
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Source and taxonomy, Version format compliance
• Version 1.3: 2024-06-05
  Changes: Data collection, Database references, Derived calculations, Other
• Version 1.4: 2024-10-23
  Changes: Structure summary