1KON | pdb_00001kon

CRYSTAL STRUCTURE OF E.COLI YEBC

• PDB DOI: https://doi.org/10.2210/pdb1KON/pdb

• Classification: UNKNOWN FUNCTION
• Organism(s): Escherichia coli
• Expression System: Escherichia coli BL21
• Mutation(s): No 


• Deposited: 2001-12-21 Released: 2002-07-17 
• Deposition Author(s): Jia, J., Smith, C., Lunin, V.V., Matte, A., Cygler, M., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.20 Å
• R-Value Free: 
  0.317 (Depositor) 
• R-Value Work: 
  0.273 (Depositor) 
• R-Value Observed: 
  0.273 (Depositor) 

Literature

UNPUBLISHED

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 26.74 kDa 
• Atom Count: 1,732 
• Modeled Residue Count: 233 
• Deposited Residue Count: 249 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein yebC	A	249	Escherichia coli	Mutation(s): 0  Gene Names: yebC
UniProt
Find proteins for P0A8A0 (Escherichia coli (strain K12)) Explore P0A8A0  Go to UniProtKB:  P0A8A0

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.20 Å
• R-Value Free:  0.317 (Depositor) 
• R-Value Work:  0.273 (Depositor) 
• R-Value Observed: 0.273 (Depositor) 

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 39.56	α = 90
b = 73.48	β = 97.89
c = 39.26	γ = 90

Software Package:

Software Name	Purpose
SOLVE	phasing
CNS	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2002-07-17 
Deposition Author(s): Jia, J., Smith, C., Lunin, V.V., Matte, A., Cygler, M., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

Revision History  

• Version 1.0: 2002-07-17
  Type: Initial release
  
• Version 1.1: 2008-04-27
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2018-01-31
  Changes: Experimental preparation
• Version 1.4: 2024-02-14
  Changes: Data collection, Database references