1K39

The structure of yeast delta3-delta2-enoyl-COA isomerase complexed with octanoyl-COA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.29 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.205 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
d3,d2-enoyl CoA isomerase ECI1
A, B, C
280Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Gene Names: ECI1
EC: 5.3.3.8
Find proteins for Q05871 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to Gene View: ECI1
Go to UniProtKB:  Q05871
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A, C
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
CO8
Query on CO8

Download SDF File 
Download CCD File 
A, B, C
OCTANOYL-COENZYME A
C29 H50 N7 O17 P3 S
KQMZYOXOBSXMII-CECATXLMSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.29 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.205 
  • Space Group: P 41 21 2
Unit Cell:
Length (Å)Angle (°)
a = 116.650α = 90.00
b = 116.650β = 90.00
c = 216.780γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
TRUNCATEdata reduction
REFMACrefinement
CCP4data scaling
AMoREphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2003-08-05
    Type: Initial release
  • Version 1.1: 2008-04-27
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Advisory, Derived calculations, Version format compliance