1JXV

Crystal Structure of Human Nucleoside Diphosphate Kinase A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.207 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of human nucleoside diphosphate kinase A, a metastasis suppressor.

Min, K.Song, H.K.Chang, C.Kim, S.Y.Lee, K.J.Suh, S.W.

(2002) Proteins 46: 340-342


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Nucleoside Diphosphate Kinase A
A, B, C, D, E, F
152Homo sapiensGene Names: NME1 (NDPKA, NM23)
EC: 2.7.4.6
Find proteins for P15531 (Homo sapiens)
Go to Gene View: NME1
Go to UniProtKB:  P15531
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.207 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 74.210α = 90.00
b = 78.110β = 101.33
c = 82.290γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
X-PLORrefinement
SCALEPACKdata scaling
AMoREphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2002-04-10
    Type: Initial release
  • Version 1.1: 2008-04-27
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance